特聘教授 费章君


个人简介
费章君,博士,上海师范大学特聘教授,美国康奈尔大学植物研究所副教授。主要从事园艺作物尤其是蔬菜作物基因组、转录组以及生物信息学研究。在Nature,Nature Genetics, Nature Biotechnology, Plant Cell, Nucleic Acids Research, Plant Journal, Plant Physiology, Bioinformatics等杂志共发表论文60余篇。


近年代表论文(*通讯作者)
1.Zhong S, Fei Z*, Chen Y-R, Zheng Y, Huang M, Vrebalov J, McQuinn R, Gapper, Liu B, Xiang J, Shao Y, Giovannoni JJ (2013) Single-base resolution methylomes of tomato fruit development reveal epigenome modifications associated with ripening. Nature Biotechnology 31:154-159
2.Guo S, Zhang J, Sun H, Salse J, Lucas W, Zhang H, Zheng Y, Mao L, Ren Y, Wang Z, Min J, Guo X, Murat F, Ham B, Zhang Z, Gao S, Huang M, Xu Y, Zhong S, Bombarely A, Mueller L, Zhao H, He H, Zhang Y, Zhang Z, Huang S, Tan T, Pang E, Lin K, Hu Q, Kuang H, Ni P, Wang B, Liu J, Kou Q, Hou W, Zou X, Jiang J, Gong G, Klee K, Schoof H, Huang Y, Hu X, Dong S, Liang D, Wang J, Wu K, Xia Y, Zhao X, Zheng Z, Xing M, Liang X, Huang B, Lv T, Wang J, Yin Y, Yi H, Li R, Wu M, Levi A, Zhang X, Giovannoni J, Wang J, Li Y, Fei Z*, Xu Y (2013) The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions. Nature Genetics 45:51-58
3.Di Shen D, Sun H, Huang M, Zheng Y, Li X, Fei Z* (2013) RadishBase: A database for genomics and genetics of radish. Plant Cell Physiol 54:e3
4.The Tomato Genome Consortium (2012) The tomato genome sequence provides insights into fleshy fruit evolution. Nature 485:635–641
5.Li R, Gao S, Hernandez AG, Wechter WP, Fei Z*, Ling K-S (2012) Deep sequencing of small RNAs in tomato for virus and viroid identification and strain differentiation. PLoS ONE 7:e37127
6.Matas AJ, Yeats TH, Buda GJ, Zheng Y, Chatterjee S, Tohge T, Ponnala L, Adato A, Aharoni A, Stark R, Fernie AR, Fei Z, Giovannoni JJ, Rose JK. (2011) Tissue- and cell-type specific transcriptome profiling of expanding tomato fruit provides insights into metabolic and regulatory specialization and cuticle formation. Plant Cell23, 3893-3910
7.Clepet C, Joobeur T, Zheng Y, Jublot D, Huang MY, Truniger V, Boualem A, Hernandez-Gonzalez ME, Dolcet-Sanjuan R, Portnoy V, Mascarell-Creus A, Cano-Delgado AI, Katzir N, Bendahmane A, Giovannoni JJ, Aranda MA, Garcia-Mas J, Fei Z* 2011. Analysis of expressed sequence tags generated from full-length enriched cDNA libraries of melon. BMC Genomics12, 252
8.Fei Z*, Joung JG, Tang X, Zheng Y, Huang M, Lee JM, McQuinn R, Tieman DM, Alba R, Klee HJ, Giovannoni JJ. (2011) Tomato Functional Genomics Database: a comprehensive resource and analysis package for tomato functional genomics. Nucleic Acids Res39, D1156-1163
9.Joung JG, Fei Z.* (2009) Identification of microRNA regulatory modules in Arabidopsis via a probabilistic graphical model. Bioinformatics25, 387-393
10. Joung JG, Corbett AM, Fellman SM, Tieman DM, Klee HJ, Giovannoni JJ, Fei Z.* (2009) Plant MetGenMAP: an integrative analysis system for plant systems biology. Plant Physiol151, 1758-1768



 
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